FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333629

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333629
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6309662
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGCCC8554.9007213E-87.6650413
ACCGCGC9302.726847E-87.41889861
CCGCGCC11106.84704E-76.2149972
GCGCCCG9501.5811222E-56.17232664
GATCGGA7600.0097527655.454729669
CGCCCGG12603.7712285E-55.20123675
Produced by FastQC (version 0.11.5)