FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333631

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333631
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5150186
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTGCG2300.00879713410.4978959
CGCGCCC7504.7621143E-98.7375663
ACCGCGC8801.1295924E-98.23251
CCGCGCC9303.3305696E-97.78853132
GCGCCCG7705.890179E-77.61483574
TCGGAAG4900.00525065657.05138569
CGCCCGG11258.7207445E-76.13162475
CACCCGG7350.00686910935.63108445
Produced by FastQC (version 0.11.5)