FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333640

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333640
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7990946
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG4502.4992006E-48.43321569
GATCGGA10305.434161E-55.69409569
AGATCGG11153.0276688E-55.56932467
TGAGACG11706.265897E-55.3201021
ATCGGAA10655.3128717E-45.183026369
Produced by FastQC (version 0.11.5)