FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333642

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333642
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6762345
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGACGC850.00412363220.29292554
TCGGGTA2900.0044538259.5166833
GATCGGA9209.591973E-66.375238469
AGATCGG9206.533183E-56.000224669
TCGGAAG8400.00504198535.33948569
Produced by FastQC (version 0.11.5)