FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333644

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333644
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6931220
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACGCT1901.2838865E-414.52527413
CGGGATA3300.00121773499.40841614
TACGCAA3150.0087863448.76152953
GATCGGA10601.8189894E-128.46251269
AGATCGG11300.08.2430168
TCGGAAG9404.087269E-97.70711668
ATCGGAA10101.6365448E-87.17290867
CGGAAGA9452.0760563E-66.571620569
Produced by FastQC (version 0.11.5)