FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333646

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333646
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11286269
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTACGA4100.0086549287.573167327
TCCAACG6850.0031340056.04333735
GATCGGA11306.0805723E-65.800727468
ATCGGAA12455.2508894E-65.542018468
AGATCGG12503.295768E-55.24385868
Produced by FastQC (version 0.11.5)