FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333649

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333649
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6681833
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGGAAG7957.524435E-66.95214268
GATCGGA8059.048856E-66.866191469
CGCTGGA5850.0040409896.491603456
AGATCGG8351.1036326E-46.205410565
CGGAAGA8802.2617963E-45.888441669
ATCGGAA9650.0045617115.011485667
Produced by FastQC (version 0.11.5)