FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333657

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333657
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7175865
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCCG1250.001943428116.55811358
GCGACCT2102.99551E-413.14447462
GATCGGA7957.523133E-66.952246769
AGATCGG8652.6173642E-56.38874668
ATCGGAA8753.090759E-56.316612769
Produced by FastQC (version 0.11.5)