FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333660

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333660
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9543644
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTGCGAC3650.0030422918.50720147
GATCGGA13652.037632E-86.06586769
CTCGTCA6300.008796986.023522451
AGATCGG14651.46865204E-85.8870367
ATCGGAA13551.1174052E-75.856024369
TCGGAAG13956.9042726E-65.19349169
Produced by FastQC (version 0.11.5)