FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333661

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333661
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9543644
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT3450.00180291099.01218769
AGCGTCG4109.1425865E-48.425364568
GATCGGA13454.1836756E-116.934482668
ACACGCT5150.0085202446.707572568
ATCGGAA15051.4551915E-116.65684269
AGATCGG14804.274625E-106.30194567
AGAGCGT10806.347859E-45.118031569
Produced by FastQC (version 0.11.5)