FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333689

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333689
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6704472
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG2800.00329597089.86981569
AGATCGG9304.7871633E-45.571669669
TCGGAAG8150.00348389085.50956668
ATCGGAA8950.00178055585.403021367
GATCGGA8650.00701538755.191132566
Produced by FastQC (version 0.11.5)