FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333721

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333721
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8558747
Sequences flagged as poor quality0
Sequence length75
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGTCCG1550.00812747913.35201127
ACCGCGC12605.14774E-106.8448281
CGCGCCC11201.6520062E-86.77554853
GATCGGA9251.0241494E-56.34839769
AGATCGG9904.3572927E-66.280500469
ATCGGAA10106.033306E-66.156132769
GCGCCCG12155.440652E-75.96176964
CCGCGCC14053.766945E-85.89226532
CGCCCGG18851.2551027E-105.67267135
Produced by FastQC (version 0.11.5)