FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333723

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333723
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7788743
Sequences flagged as poor quality0
Sequence length75
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGTGA658.670508E-426.53379457
CGTCGTG3450.00180420049.01143665
GCGTCGT3100.0076206198.91511269
CGGGACC4805.3270887E-58.6230424
AGCGTCG4058.1854715E-48.51970163
GATCGGA10251.580811E-76.740261667
TCGGAAG11251.2454075E-76.44859869
ATCGGAA10753.7468453E-76.4267668
AGATCGG11803.0634328E-76.14763266
Produced by FastQC (version 0.11.5)