FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333727

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333727
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6358453
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGAGA500.00773212427.60394162
GCGTCGT3207.584582E-510.7951967
AGCGTCG3301.03629936E-410.46806366
CGTCGTG3351.2067042E-410.31182468
AGATCGG10952.2148346E-55.67923769
GATCGGA9801.5934245E-45.64060369
Produced by FastQC (version 0.11.5)