FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333729

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333729
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6151247
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTCGATG3400.00159510329.134109527
GCGCGAT3956.398132E-48.73330141
GATCGGA9656.8212103E-97.505980569
CACGTAG5100.0078472396.764906455
GGCGCGA5850.00407472256.486422540
AGATCGG10251.1565899E-66.39354468
AAACGGT6250.0081045686.0713941
Produced by FastQC (version 0.11.5)