FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333739

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333739
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5422558
Sequences flagged as poor quality0
Sequence length75
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGCCCG1450.005226002514.27264627
GGTCGCC2357.7392434E-411.74365943
GTCGTGT6108.471546E-46.786545866
AGATCGG12502.1575033E-86.34738968
AAGATCG7050.00431775775.871991667
GATCGGA12404.8930196E-65.564083669
Produced by FastQC (version 0.11.5)