FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333742

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333742
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6477957
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG12153.6379788E-127.66708768
GATCGGA11701.2732926E-117.667086669
GGCACGC5150.0086311236.69851817
TAGATCG5200.0094637586.634825766
ATCGGAA11752.8934483E-76.16629569
TCGGAAG10802.8152535E-66.069777568
CGGAAGA11951.5548307E-55.485656369
CGAGGTC8850.0092820465.06799665
Produced by FastQC (version 0.11.5)