FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333750

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333750
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5906403
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC7106.78146E-46.317211669
ATCGGAA17901.1641532E-95.589659768
GATCGGA18806.89397E-105.50549667
TCGGAAG17554.2127795E-95.504543369
TAGATCG7550.0092111725.483155360
AAGATCG10102.5008732E-45.465614369
GACGGAG10951.3593862E-45.35878664
AGATCGG20405.5460987E-95.073735766
CGGAGTC9550.004076085.05706936
Produced by FastQC (version 0.11.5)