FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333751

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333751
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5906403
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG7058.418323E-56.850219769
GCGTCGT6450.00159518336.41781467
CGTCGTG6850.003135556.042948768
AGAGCGT12852.467914E-75.90588769
CGCGCCC9459.62297E-55.8417373
AGCGTCG7250.0058933195.70968966
TCGGAAG18051.4406396E-95.542253569
GTCGTGT8450.0054142765.307173362
ATCGGAA19206.668415E-95.210207568
GATCGGA19551.0395524E-85.117016367
CGGAAGA18952.6526322E-85.097040765
Produced by FastQC (version 0.11.5)