FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333768

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333768
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4530857
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG5753.3960532E-87.82587694-95
TAGATCG2850.0096766587.479023594-95
GATCGGA4705.7233392E-57.05468294-95
GCTTAAC11450.00463293635.3779299
Produced by FastQC (version 0.11.5)