FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333804

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333804
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3880641
Sequences flagged as poor quality0
Sequence length76
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGTTA1300.002293065716.1528435
ATGGTCG1554.054589E-415.80832448
GTACCCG1350.002949512815.5545937
CGTGGAT4000.00608487477.87694860
Produced by FastQC (version 0.11.5)