FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333810

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333810
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4274294
Sequences flagged as poor quality0
Sequence length75
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAGGCG3703.3254578E-49.32427148
GGCCGTG4000.00693852877.762456444
AGATCGG7856.3379393E-67.032712569
GATCGGA7903.6803583E-46.11467768
ATCGGAA8700.00126133235.552407769
Produced by FastQC (version 0.11.5)