FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333811

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333811
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4274294
Sequences flagged as poor quality0
Sequence length75
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTGCGA500.007743247327.59560632
GATCGCG1400.00412897714.78803311
CGATTAG1550.00810432613.3575565
AGATCGG8604.376434E-77.22020369
AAAACCG7400.00103623556.09894851
ATCTCGG10756.0707243E-45.13406650
GATCTCG8900.0099269825.038749
Produced by FastQC (version 0.11.5)