FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333824

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333824
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6056679
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTTAAC2357.7388255E-411.74377623
GGCAACG4850.00482357.11326553
TCGGAAG12401.8213541E-86.399968667
GATCGGA12702.9738658E-86.24894368
ATCGGAA12601.6748345E-76.024539566
AGATCGG13257.070048E-85.989404767
CGGAAGA13701.3910176E-75.792815768
Produced by FastQC (version 0.11.5)