FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333825

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333825
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6056679
Sequences flagged as poor quality0
Sequence length75
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT4855.9987044E-58.53596768
TAGATCG5109.569929E-47.44107669
CGTCGTG5603.183358E-47.392757469
AGCGTCG5855.25164E-47.077119467
CTACGTG5050.00714251076.831083338
TCGGAAG12805.160473E-96.4689367
GATCGGA13307.653762E-85.966084568
AGATCGG13501.0353324E-75.87794167
AGAGCGT9254.5296075E-45.59451965
ATCGGAA13851.0477834E-65.4800766
CGGAAGA14051.378945E-65.402062468
Produced by FastQC (version 0.11.5)