FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333826

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333826
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5032664
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG4007.2372064E-48.62576369
AGATCGG9603.7057544E-76.828728769
TCGGAAG8652.661271E-56.381369667
CGGAAGA9105.569154E-56.0664768
GATCGGA8852.4839677E-45.84797569
ATCGGAA9103.6310466E-45.68669466
GCGCCAC7550.0092142745.48294841
Produced by FastQC (version 0.11.5)