FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333827

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333827
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5032664
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGGAA1500.006544813513.79619567
ATCCCGT4150.00104448428.312777544
AGATCGG10752.613262E-66.096235369
CGGAAGA10308.488114E-66.02770368
ATCGGAA9701.407052E-45.689604366
TCGGAAG9355.254434E-45.533232767
GATCGGA9556.975226E-45.41789265
AAGAGCG11008.396626E-45.016997369
Produced by FastQC (version 0.11.5)