FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333830

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333830
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5868291
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG1503.5285222E-416.09981546
TGCCGTC2701.9133724E-411.50035848
CTCGTAT2701.9147365E-411.499475542
TATCTCG4000.0069417887.762146539
AGATCGG8101.3049303E-67.242076468
GATCGGA8452.5400568E-66.94210969
CAGATCG5100.0078353846.76595469
Produced by FastQC (version 0.11.5)