FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333831

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333831
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5868291
Sequences flagged as poor quality0
Sequence length75
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA1450.005217186614.27630646
ACTACGA1550.00811586913.35479853
TCGCCGT2000.003099889712.07537645
GCGTCGT2600.001800624810.61535311
ACTCGCT3000.0058839799.20028759
AACGGGG4300.0014789488.0254891
AGATCGG8604.371741E-77.22084768
CTCGGTG5450.00193548456.96280737
GATCGGA8855.252821E-66.62704369
TCGGTGG5900.0044513026.43174638
Produced by FastQC (version 0.11.5)