FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333832

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333832
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6582948
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGTAGT2250.00746303910.73329749
TAGATCG5151.2585951E-69.38110469
ACCGCGC12300.09.2678241
CCGCGCC15600.07.51857762
AGATCGG10453.1293894E-86.93436167
GATCGGA10101.2308374E-76.833477568
CAGATCG5800.00371023926.54482269
CGCGCCC11754.26553E-86.45901353
ATCGGAA9803.7507562E-66.33839969
GCGCCCG13209.993528E-96.27218254
CGGCTAA11205.230564E-65.85243659
ACCACGC22350.05.71864461
CCGGCTA11508.1747585E-65.69976478
ACCGCAC9701.3780937E-45.6979311
Produced by FastQC (version 0.11.5)