FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333833

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333833
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6582948
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT3100.0077050718.90309969
CGCGATC3650.0030387558.5082163
GCGCGAT3700.0034324658.3943232
ACCGCGC12250.08.1697141
ATCGGAA10159.732375E-76.458036469
CCGCGCC15503.092282E-116.4567092
CGCACCC8259.4928146E-56.27373463
GATCGGA10055.679085E-66.17901768
AGATCGG11054.1576495E-65.93222367
AGAGCGT8408.09141E-45.75004966
ACCGCAC9708.543554E-45.3365981
CGCGCCC12402.8743525E-55.2871393
TCGGAAG10504.3461655E-45.257148365
Produced by FastQC (version 0.11.5)