FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333837

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333837
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6384762
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGCCG3400.00159737019.13269652
TTGGACG3650.00304146378.50736954
AGATCGG11457.583436E-65.72519668
GATCGGA12001.6672979E-55.46279169
AGAGCGT8500.0057923235.276751568
Produced by FastQC (version 0.11.5)