FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333839

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333839
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5156287
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGCCG809.575866E-525.8719444
AGATCGG7151.3014102E-57.236274769
GATCGGA6450.00159655246.41728669
CACGATC7000.00399013245.91375948
GTCGCCC9450.00357020835.111151720
Produced by FastQC (version 0.11.5)