FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333842

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333842
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6041550
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCCGTC3050.00674102469.04930848
GAACGAT3150.008788528.76123124
TAGATCG4050.0077419647.668107569
GATCGGA9257.051238E-55.968689469
Produced by FastQC (version 0.11.5)