FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333845

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333845
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5236447
Sequences flagged as poor quality0
Sequence length75
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTGCGG4100.008658937.572623327
AGATCGG11551.388471E-65.974107769
ATCGGAA10353.542969E-45.333406469
GATCGGA10604.967838E-45.20761868
Produced by FastQC (version 0.11.5)