FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333848

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333848
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5558618
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA11902.3514312E-65.799738469
AGATCGG11701.0871614E-55.603935268
TCGGAAG10957.8383315E-45.041694664
Produced by FastQC (version 0.11.5)