FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333849

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333849
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5558618
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGGTGG4956.9611263E-47.66641438
GCGTCGT5200.0094609596.63499367
GTCGTGT6150.00684791436.17091769
CGAGGTC7250.00588723045.710207551
AGATCGG12553.515833E-55.22326468
GATCGGA12201.2553716E-45.090316369
Produced by FastQC (version 0.11.5)