FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333852

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333852
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5833373
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA9602.6808048E-66.469890668
ATCGGAA10159.700634E-76.459211369
AGATCGG10701.5606392E-55.80446367
Produced by FastQC (version 0.11.5)