FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333853

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333853
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5833373
Sequences flagged as poor quality0
Sequence length75
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT3300.00121645939.40944467
CGGTGAC3750.00388243268.28052445
CGTCGTG3850.00492295958.065168
AGCGTCG3850.0049237198.06496166
AGATCGG9753.4624754E-66.369469667
GATCGGA9501.5751646E-56.173809568
ATCGGAA10202.878955E-45.41187569