FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333854

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333854
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6081552
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGTCGT3550.00236309028.74767367
TCGGAAG13552.6011548E-96.36670668
CGGAAGA14451.0786607E-85.970163369
ATCGGAA13801.6114973E-75.75078567
GATCGGA14052.3140637E-75.64845766
AGATCGG14504.358826E-75.47293565
Produced by FastQC (version 0.11.5)