FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333864

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333864
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4733374
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGGGCT3300.0012177329.40829212
AGATCGG8509.4007177E-45.6825969
TCGGAAG7900.00244183055.677152667
Produced by FastQC (version 0.11.5)