FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333870

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333870
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5563578
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGATGTA2150.005326063411.231334
GTCTTCG3150.0087895628.76108219
TCGGAAG8256.4289814E-45.854574769
ATCGGAA8850.0092850565.067821568
GATCGGA8850.0092908845.067548367
Produced by FastQC (version 0.11.5)