FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333874

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333874
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6086662
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA9655.360198E-87.15125167
TCGGAAG10159.699124E-76.459288668
GATCGGA9652.9206876E-66.436125866
AGATCGG10055.6691097E-66.17965665
CGGAAGA11255.618662E-65.827713569
Produced by FastQC (version 0.11.5)