FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333875

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333875
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6086662
Sequences flagged as poor quality0
Sequence length75
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT3150.0087846748.76170268
TCGGAAG10752.6044017E-66.097532768
ATCGGAA10601.343962E-55.858643567
CGGAAGA11303.7448426E-55.49544769
GATCGGA11001.466385E-45.331825766
CGGAGTC9650.00464030545.0045728
Produced by FastQC (version 0.11.5)