FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333885

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333885
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3579640
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA4851.4915713E-109.79328394-95
AGATCGG6651.0913936E-118.57096394-95
TCGGAAG5355.475582E-67.10241894-95
CAGATCG4000.00379397076.530895794-95
ATCGGAA6052.2636315E-45.888109792-93
CGGAAGA6253.521362E-45.69969194-95
Produced by FastQC (version 0.11.5)