FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333938

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333938
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4905121
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGACGT850.004124797420.29187
CGGAAGA6757.102608E-88.6889669
GCTCCGT4900.00532823347.0407358
TCGGAAG7451.7263685E-46.48327468
ATCGGAA7451.7270548E-46.483075667
AGATCGG7258.734946E-46.18613165
GATCGGA7258.73602E-46.18606866
CCGGGTT8701.9698302E-45.948323769
Produced by FastQC (version 0.11.5)