FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333940

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333940
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4826217
Sequences flagged as poor quality0
Sequence length75
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG9703.18397E-66.402148769
GATCGGA8600.0010910355.61635568
TCGGAAG8150.003533365.50291464
ATCGGAA8900.00168428295.426814663
Produced by FastQC (version 0.11.5)