FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333941

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333941
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4826217
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG3209.194859E-49.70163669
TAGATCG3400.00160015749.130856568
AGATCGG9504.0401574E-87.26204369
AGAGCGT5956.3863245E-46.956915469
CTCGCCA5500.00213078676.899584319
TGGCCGC8059.218762E-66.8574422
CGGAAGA9355.246325E-45.533852665
TCGGAAG8450.005417185.30687869
ATCGGAA9400.00334826865.137509369
GATCGGA8750.0081482055.12492869
Produced by FastQC (version 0.11.5)