FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333951

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333951
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5115765
Sequences flagged as poor quality0
Sequence length75
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGGAAG8553.069601E-66.85873169
AGATCGG9254.5364027E-45.59384666
GATCGGA9254.5370017E-45.59379167
CCGGGTT8550.00621740245.244911769
ATCGGAA9650.0046410635.004462267
Produced by FastQC (version 0.11.5)