Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005333952 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 5251034 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TGACCGC | 230 | 0.008786529 | 10.499606 | 33 |
CAGATCG | 635 | 2.4137353E-6 | 8.149689 | 68 |
AGATCGG | 1545 | 0.0 | 7.1457033 | 69 |
TCGGAAG | 1260 | 1.0651038E-6 | 5.750058 | 66 |
ATCGGAA | 1350 | 3.7913305E-6 | 5.366925 | 65 |
CGGAAGA | 1355 | 4.0613722E-6 | 5.3467646 | 67 |